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Corante Blogs examine, through the eyes of leading observers, analysts, thinkers, and doers, critical themes and memes in technology, business, law, science, and culture.

The Press Will Be Outsourced Before Stopped

Vin Crosbie, on the challenges, financial and otherwise, that newspaper publishers are facing: "The real problem, Mr. Newspaperman, isn't that your content isn't online or isn't online with multimedia. It's your content. Specifically, it's what you report, which stories you publish, and how you publish them to people, who, by the way, have very different individual interests. The problem is the content you're giving them, stupid; not the platform its on."
by Vin Crosbie in Rebuilding Media

Travels In Numerica Deserta

There's a problem in the drug industry that people have recognized for some years, but we're not that much closer to dealing with it than we were then. We keep coming up with these technologies and techniques which seem as if they might be able to help us with some of our nastiest problems - I'm talking about genomics in all its guises, and metabolic profiling, and naturally the various high-throughput screening platforms, and others. But whether these are helping or not (and opinions sure do vary), one thing that they all have in common is that they generate enormous heaps of data.
by Derek Lowe in In the Pipeline

Disrobing the Emperor: The online “user experience” isn't much of one

Now that the Web labor market is saturated and Web design a static profession, it's not surprising that 'user experience' designers and researchers who've spent their careers online are looking for new worlds to conquer. Some are returning to the “old media” as directors and producers. More are now doing offline consulting (service experience design, social policy design, exhibition design, and so on) under the 'user experience' aegis. They argue that the lessons they've learned on the Web can be applied to phenomena in the physical and social worlds. But there are enormous differences...
by Bob Jacobson in Total Experience

Second Life: What are the real numbers?

Clay Shirky, in deconstructing Second Life hype: "Second Life is heading towards two million users. Except it isn’t, really... I suspect Second Life is largely a 'Try Me' virus, where reports of a strange and wonderful new thing draw the masses to log in and try it, but whose ability to retain anything but a fraction of those users is limited. The pattern of a Try Me virus is a rapid spread of first time users, most of whom drop out quickly, with most of the dropouts becoming immune to later use."
by Clay Shirky in Many-to-Many

The democratisation of everything

Over the last few years we've seen old barriers to creativity coming down, one after the other. New technologies and services makes it trivial to publish text, whether by blog or by print-on-demand. Digital photography has democratised a previously expensive hobby. And we're seeing the barriers to movie-making crumble, with affordable high-quality cameras and video hosting provided by YouTube or Google Video and their ilk... Music making has long been easy for anyone to engage in, but technology has made high-quality recording possible without specialised equipment, and the internet has revolutionised distribution, drastically disintermediating the music industry... What's left? Software maybe? Or maybe not."
by Suw Charman in Strange Attractor

RNA Interference: Film at Eleven

Derek Lowe on the news that the Nobel Prize for medicine has gone to Craig Mello and Andrew Fire for their breakthrough work: "RNA interference is probably going to have a long climb before it starts curing many diseases, because many of those problems are even tougher than usual in its case. That doesn't take away from the discovery, though, any more than the complications of off-target effects take away from it when you talk about RNAi's research uses in cell culture. The fact that RNA interference is trickier than it first looked, in vivo or in vitro, is only to be expected. What breakthrough isn't?"
by Derek Lowe in In the Pipeline

PVP and the Honorable Enemy

Andrew Phelps: "Recently my WoW guild has been having a bit of a debate on the merits of Player-vs.-Player (PvP) within Azeroth. My personal opinion on this is that PvP has its merits, and can be incredible fun, but the system within WoW is horridly, horribly broken. It takes into account the concept of the battle, but battle without consequence, without emotive context, and most importantly, without honor..."

From later in the piece: "When I talk about this with people (thus far anyway) I typically get one of two responses, either 'yeah, right on!' or 'hey, it’s war, and war isn’t honorable – grow the hell up'. There is a lot to be said for that argument – but the problem is that war in the real historical world has very different constraints that are utterly absent from fantasized worlds..."
by Andrew Phelps in Got Game

Rats Rule, Right?

Derek Lowe: "So, you're developing a drug candidate. You've settled on what looks like a good compound - it has the activity you want in your mouse model of the disease, it's not too hard to make, and it's not toxic. Everything looks fine. Except. . .one slight problem. Although the compound has good blood levels in the mouse and in the dog, in rats it's terrible. For some reason, it just doesn't get up there. Probably some foul metabolic pathway peculiar to rats (whose innards are adapted, after all, for dealing with every kind of garbage that comes along). So, is this a problem?.."
by Derek Lowe in In the Pipeline

Really BAD customer experience at Albertsons Market

Bob Jacobson, on shopping at his local Albertsons supermarket where he had "one of the worst customer experiences" of his life: "Say what you will about the Safeway chain or the Birkenstock billionaires who charge through the roof for Whole Foods' organic fare, they know how to create shopping environments that create a more pleasurable experience, at its best (as at Whole Foods) quite enjoyable. Even the warehouses like Costco and its smaller counterpart, Smart & Final, do just fine: they have no pretentions, but neither do they dump virtual garbage on the consumer merely to create another trivial revenue stream, all for the sake of promotions in the marketing department..."
by Strange Attractor in Total Experience

The Guardian's "Comment is Free"

Kevin Anderson: "First off, I want to say that I really admire the ambition of the Guardian Unlimited’s Comment is Free. It is one of the boldest statements made by any media company that participation needs to be central to a radical revamp of traditional content strategies... It is, therfore, not hugely surprising to find that Comment is Free is having a few teething troubles..."
by Kevin Anderson in strange
In the Pipeline: Don't miss Derek Lowe's excellent commentary on drug discovery and the pharma industry in general at In the Pipeline

The Loom

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October 04, 2004

If These Lice Could Talk

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Posted by Carl Zimmer

lice.jpgContempt is never wise in biology. The creature that you look down on as lowly, degenerate, or disgusting may actually turn out to be sophisticated, successful, and--in some cases--waiting to tell you a lot about yourself. That's certainly the case for lice.

The human body louse, Pediculus humanus, has two ways of making a living--either dwelling on the scalp, feeding on blood, or snuggling into our clothes and come out once or twice a day to graze on our bodies. For lice, we humans are the world. They cannot live for more than a few hours away from our bodies.Only by crawling from one host to the next does their species escape extinction.

A group of louse specialists recently decided to find out where human lice came from. Have they been riding on our bodies since before we were human? A comparison of the lice that live on different primates shows that they certainly can be very loyal. If you draw an evolutionary tree of primates, and then draw a tree of their lice, they are almost identical. On the other hand, some lice can live on more than one species. And a side-by-side comparison of trees reveals that in some cases they don't form a perfect mirror. In other words, sometimes lice can make an evolutionary leap.

As the researchers report today in Public Library of Biology, they compared human lice to the lice of primates, looking at both their DNA and their anatomy. As earlier research had shown, they found a major split among lice species that live on apes and on monkeys and other primates. That reflects an ancient split in the primates themselves: our ape ancestors diverged from other primates 20-25 million years ago. The variation in louse DNA turns out to act like a sort of molecular clock, showing when they split into different lineages. The molecular clock puts the split between lice that live on humans and chimps at 5.6 million years ago--exquisitely close to the age that's been estimated for humans from studies on both DNA and fossils.

The research suggested that we've carried our lice for millions of years, since before the time of our common ancestor with chimpanzees. But after we parted company with the chimps, the lice have a remarkable story to tell. Human lice split into two lineages. One lineages is found around the world. The second is found only in North America. The worldwide branch all share a common ancestor that lived 540,000 years ago. The North American branch shares a common ancestor that lived 150,000 years ago. And finally, the two branches share a far older common ancestor, which lived a 1,180,000 years ago.

So how did these two strains of the same species become separated and then wind up back on our bodies? The researchers argue that human evolution holds the key. Paleoanthropologists and geneticists still debate over the origins of modern humans, but the rough outlines are becoming clear. The first hominids to emerge that were tall, big-brained bipeds--that weren't just upright apes, in other words--lived about 2 million years ago. They very quickly began to spread out of their birthplace in Africa to other parts of the world. They were in the Caucusus mountains 1.8 million years ago and China 1.66 million years ago. These hominids are generally called Homo erectus, although they may well have consisted of several species, rather than one. And the ranks of Asian Homo erectus may have been boosted by fresh migrations of African hominids when ecological conditions favored another journey out of Africa. But it does appear that Asian populations became pretty isolated from African hominids. The fossils of Homo erectus from a few hundred thousand years ago look pretty distinct from both African hominids and Neanderthals, with very thick skull walls and other peculiar anatomical details. Thirty years ago, most paleoanthropologists would have told you that these Asian hominids probably were the ancestors of living Asians. But that's not what the evidence gathered since then suggests. Instead, it now looks pretty clear that Homo erectus was a very distinct species than Homo sapiens, and became extinct perhaps as recently as 30,000 years ago.

Our own roots can be found in Africa. The oldest clear cut examples of Homo sapiens fossils, found in Ethiopia, date back 160,000 years. By about 100,000 years ago, our species was beginning to diverge into different populations, and these differences can still be found in the DNA of various African groups, such as the Khoisan of Southern Africa (sometimes called bushmen). By 50,000 years ago, humans were moving out of Africa. In Europe, they moved into territory occupied by Neanderthals and their ancestors for some 300,000 years. Neanderthals disappeared by 28,000 years ago. They seem to have been driven into mountainous refuges by the booming population of humans. The story in Asia has always been a bit fuzzier. Humans appear to have gotten to Australia by at least 40,000 years ago, and perhaps much earlier. By 15,000 years ago, some Asian populations of Homo sapiens made their way into the New World through Alaska. Exactly where Homo erectus was on their arrival in Asia, and how long they survived, has never been clear. It hasn't even been clear whether the two species came into contact or not.

You may be able to guess how the louse scientists interpret the data from their parasitic charges. When Homo erectus moved into Asia and became isolated from our own ancestors, their lice became isolated as well. When our own ancestors burst out of Africa around 50,000 years ago, they carried the African lice with them. The most sensational part of the story comes when humans arrive in Asia. The researchers argue that a population of humans encountered Homo erectus and picked up their lice. Their descendants then passed into North America, where they--and their lice--live today. One of the many intriguing implications of this research is that the contact may have occurred in one limited regions--the same region where Native Americans originated in Asia.

This is not the first case where our parasites have preserved our own hidden history. Our tapeworms, for example, can tell us about how our ancestors began eating meat. Malaria reveals how agriculture brought new diseases to humans over the past few thousand years. Helicobacter pylori, the bacteria that trigger stomach ulcers, maps the spread of modern humans. (I go into more detail on some of these examples in my book Parasite Rex.) And the lice probably have more to tell us.

For example, the scientists can't say for sure how humans most likely picked up Homo erectus's lice. The contact definitely had to be intimate. But did it occur when humans drove Homo erectus away from their kills? Or did these two species make love, rather than war? Although the genetic evidence indicates that Homo erectus could not have contributed a significant number of genes to our species, it's possible that they contributed a few. The answer to this question may help show how Homo erectus became extinct, leaving us as the sole hominids left on Earth.

One way to test that possibility will be to look at the other species of lice that live on humans--crabs, or Pthirus pubis. If our ancestors got body lice from Homo erectus during sex, they probably got crabs as well. Somehow, though, I'm guessing that putting together a global collection of crabs may take a little bit longer than the body lice. But it will definitely be worth the wait.

UPDATE: 10/4 9:50 PM: A question occurs to me: why didn't we pick up Neanderthal lice?

UPDATE: 10/5 6:20 PM: The link to the paper is fixed (and the paper is free--bless PLOS!)

Comments (3) + TrackBacks (0) | Category: Evolution


COMMENTS

1. Kramer on October 5, 2004 05:02 PM writes...

I think that the PLoS link isn't quite right (sorry to complain but I'm excited to read the article).

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2. Gerry on October 6, 2004 04:41 AM writes...

Great article: could title it "Of Lice and Men".

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3. Ted on October 16, 2004 12:35 AM writes...

"When our own ancestors burst out of Africa around 50,000 years ago, they carried the African lice with them. The most sensational part of the story comes when humans arrive in Africa."

Shouldn't that last "Africa" be "Asia"?

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